Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLEVATTDKEFSFKLGGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGT--AYRDWKYQINYDLSRNV--GNDSAGYFDEASVTYTGFNPVNLKFGRFYTDFGLEKA-TSSKWVTAL-ERNLTYDIADWVND---NVGTGIQA-SSVVGGMAFLSGSVFSENNNDTDGDSVKRYNLRGVFAPLHEPGNVVHLGLQYAYRDLEDSAVDTRIRPRMGMRGVSTNGGNDAGSNGNRGLFGGSSAVEGLWKDDSVWGLEGAWALGAFSAQAEYLRRTVKAERD------------REDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVVDSATREVGDAKGKTHTLGVNWYANEAVKVSANYVKAKTDKISNANGDDSGDGLVMRLQYVF |
| 2POR Chain:A ((1-301)) | --------------------------------------------------------EVKLSGDARMGVMYNGDDW-------N--FSSRSRVLFTMSGTTDSGLEFGASFKAHESVGAETGEDGTVFL-----S-GAFGKIEMGDALGASEALFGDLYEVGYTDLDDRGGNDIPYLTGDERLTAEDNPVLLYTYSAGAFSV-AASMSDGKVGETSEDDAQEMAVAAAYTF-----GNYTVGLGYEKIDSPD---------------------------------------TALMADMEQLELAAIAKFGATNVKAYYADGELDRDFARAVFDLTPVAAAATAVDHKAYGLSVDSTFGA------------------------TTVGGYVQVLDIDT-------------IDDVTYYGLGASYDLGGGASIVGGIADNDLPN--------SDMVADLGVKFKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2POR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 42559 for 2131 contacts (20.0/contact) +
2D Compatibility (PS) -28967 + (NN) 694 + (LL) 6164
1D Compatibility (HY) -2400 + (ID) 1650
Total energy: 16400.0 ( 7.70 by residue)
QMean score : 0.113
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