Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPLKQATPTYSSRTADKFVVRLPEGMREQIAEVARSHHRSMNSEIIARLEQSLLQEGALQDNLGVRLDSPELSLHERELLQRFRQLTHRQQNALVALIAHDAELAQA
1PAR Chain:A ((10-51))
------------------FNLRWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGRI------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1PAR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7019 for 199 contacts (-35.3/contact) +
2D Compatibility (PS) -4931 + (NN) -3378 + (LL) 5364
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -14714.0 ( -73.94 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_1PAR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PAR-query.scw
PDB file :
Tito_Scwrl_1PAR.pdb
: