Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISISYSTTYSGWTVADYLADWSAYFGDVNHRPGQVVDGSNTGGFNPGPFDGSQYALKSTASDA-AFIAGGDLHYTLFSNPSHTLWGKLDSIALGDTLTGGASSGGYALDSQEVSFSNLGLDSPIAQGRDGTVHKVVYGLMSGDSSALQGQIDALLKAVDPSLSINSTFDQLAAA--GVAHATPAAAAAEVGVVGVQELPHDLALAA
1B2V Chain:A ((2-174))
-AFSVNYDSSFGGYSIHDYLGQWASTFGDVNHTNGNVTD-ANSGGFYGGSLSGSQYAISSTANQVTAFVAGGNLTYTLFNEPAHTLYGQLDSLSFGDGLSGGDTSP-YSIQVPDVSFGGLNLSSLQAQGHDGVVHQVVYGLMSGDTGALETALNGILD--DYGLSVNSTFDQVAAATA------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1B2V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93129 for 1339 contacts (-69.6/contact) +
2D Compatibility (PS) -18706 + (NN) -13792 + (LL) 2436
1D Compatibility (HY) -18000 + (ID) 4550
Total energy: -145741.0 ( -108.84 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_1B2V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B2V-query.scw
PDB file :
Tito_Scwrl_1B2V.pdb
: