Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIPHDL---------------LEADTLNNLLEDFVT----REGTDNGDETPLDVRVERARHALRRGEAVILFDPESQQCQLMLRSEVPAELLRD
4HHY Chain:A ((83-158))
-LIPHDFGMKKPPLLNNADSVQAKAEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIK------VVDRDSEEAEII------------
General information:
TITO was launched using:
RESULT:
Template:
4HHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 592 for 204 contacts (2.9/contact) +
2D Compatibility (PS) -6031 + (NN) -5078 + (LL) 1808
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -14509.0 ( -71.12 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_4HHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HHY-query.scw
PDB file :
Tito_Scwrl_4HHY.pdb
: