Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRRTAFFFDELCLWHAAGPHALTLPVGGWVQPPAAAGHAESPETKRRLKSLLDVSGLTARLQLRSAPPASDEDLLRVHPAHYLERFKALSDAGGGSLGQDAPIGPGSYEIARLSAGLAIAALDAVLAGEADNAYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHGVERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQ--DGCFPPGYSGAEDIGEDRGRGFNLNVP----LLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDA--NAVDPLARMQLHSDSFRAMTAMVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRSAVRDPLRDFIELQQPNA-AFRDFQRQRLEELAAQFGLCPAQPLQAAR |
| 2VQM Chain:A ((127-386)) | ---------------------------------------------------------------------------------------------------------------ARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGL----AGGRIVLALEGGHDLTAICDASEACVSALLGNE---LDPLPEKVLQQRPNANAVRSM--EKVMEIHSKYWRC--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173294 for 2216 contacts (-78.2/contact) +
2D Compatibility (PS) -27965 + (NN) -19803 + (LL) 7336
1D Compatibility (HY) -17600 + (ID) 4700
Total energy: -236026.0 ( -106.51 by residue)
QMean score : 0.521
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