Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPQVLLSSKPPGLNSIDHAEPAGAPALEAAGCHCPGAVPTASAHAARANRGEPRDRVAGARCDFALSTGVRLAPLSPSSRPAPRTGSPHQFQRTLSTKKFASTQTTSSRWVSCNPSWRIQ
2EQD Chain:A ((7-53))
-----------------------------------------------------AKVV-----DIRIDTSAERKPISPYI-----YGSNQELDATVTAKRFGGNRTTGYNW----------
General information:
TITO was launched using:
RESULT:
Template:
2EQD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6556 for 157 contacts (41.8/contact) +
2D Compatibility (PS) -4814 + (NN) -2978 + (LL) 2780
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -1556.0 ( -9.91 by residue)
QMean score : 0.151
(partial model without unconserved sides chains):
PDB file :
Tito_2EQD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQD-query.scw
PDB file :
Tito_Scwrl_2EQD.pdb
: