Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQPVAFVTGCSSGIGRALA-----DAFQRAGYRVWASARKE-------DDVRALA--EAGFQAVQLDVNDAAALARLAEELGVEAAGLDVLVNNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFP-LLRRKSGLVVNVGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVEVLEVQPGAIASNFGASASREMDSVVDERSPWWPLRRQIQARAAASQ------DNPTSAEDFARQLLAAVQRRPRPPLVRIGNGSRALPALARWLPRGLLERLLKKRFGLDTRL |
| 1QYV Chain:A ((4-263)) | ----VVLITGCSSGIGLHLAVRLASDPSQ--SFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARER--VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT--------SPEEVLD-RTDIHTFHRFYQYLAHSKQVFREAAQNP---EEVAEVFLTAL-RAPKPTL-RYFTTERFLPLL----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108621 for 1785 contacts (-60.9/contact) +
2D Compatibility (PS) -25271 + (NN) -13969 + (LL) 3092
1D Compatibility (HY) -20000 + (ID) 4650
Total energy: -169419.0 ( -94.91 by residue)
QMean score : 0.519
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