Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLSLYLLTVLIWGTTWIAIKLQMGPVAITLSIAYRFALAALVLF--AVLLLGRRLQRLDARGQRLCMAQGVCLFCLNF------ICFYTASQWIPS---GLVAVVFSTATL----------WNALNARLWFGQRIASNVMAGGGLGLLG-LGLLF-WPELVGHQATPETFYGLGLALLG------TLCFSTGNMLSSLQQKAGIRPLTGNAWSMLYGTLILLALCLFQGVPLSFDWSARYVGSLLYLAIPGSVIGFTAYLTLVGRMGPDRAAYCTVLFPVVALNISAFAEGYRWTAPAL--AGLVLVMLGNVL--VFRKPKAPALAGPARST |
| 4R1D Chain:B ((1-301)) | MDKTGWITHCF--GRFLIDL-----PPDAVINAGYYLWGDRIEYLDDKPTELAARVDRLEQEWRTQRHKSKGNMFLRKIDFGNESVGLLSWSSEVASKTYLLDTYVTSKPTWHVYRWKGKVSVDREQHAVEISRALARNLRSRAPKEIPSEPGFCIDHAYIAGDSFQVERF-GVGVTFPEHPGARFEFRSSTGAELNSLLERV--DGFVQNMLSTFAGMETLRKGKHPVGSLPG--------EEYLVAGSDKGQRGYTFMWEVQGKEESLTEPNLTAGLAVLERS----NENGKPPPPAFKSDKEALELWDTIVDSIRVRPTS---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259318 for 1835 contacts (-141.3/contact) +
2D Compatibility (PS) -28821 + (NN) -7384 + (LL) 2324
1D Compatibility (HY) -3200 + (ID) 2300
Total energy: -298699.0 ( -162.78 by residue)
QMean score : 0.103
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