Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGVSRLLSLALLGAALHWAPAQAEEQPRLFELLGQPGYKATW--HAMFKGESDVPKWVSDASGPSSPSTSLSLEGQPYVLANSCKPHDCGNNRLLVAFRGDKSAAYGLQVSLPDEPAEVMQTPSKYATYRWYGEPSRQVRELLMKQLESDPNWK |
4IP0 Chain:A ((15-78)) | -----------LNGATLAIIPGDPARVQKIAELMDNPVFLASHREYTVYRAELDGQSVVVCSTGIGGPSTSIAVE-------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 8493 for 415 contacts (20.5/contact) +
2D Compatibility (PS) -6231 + (NN) 104 + (LL) 4984
1D Compatibility (HY) -3600 + (ID) 900
Total energy: 2850.0 ( 6.87 by residue)
QMean score : 0.006
|
|
|