Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAADRVMQSYGRCCASTGFFDDFYRHFLASSPQIRAKFATT-DMT------------AQKHLLRAGIMNLVMYARGMSDSKLRALGASHS-RAALDIRPELYDLWLDALLMAVAEHD-RDCDAETRDAWRDVMGRGIAVIKSYY
1V4X Chain:B ((6-145))
-QERSIIAGIFANLN-YEDIGPKALARCLIVYPWTQRYFGAYGDLSTPDAIKGNAKIAAHGVKVLHGLDRAVKNMDNI-NEAYSELSVLHSDK--LHVDPDNFRILGDCLTVVIAANLGDAFTVETQCAFQKFLAVVVFALGRKY
General information:
TITO was launched using:
RESULT:
Template:
1V4X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63832 for 883 contacts (-72.3/contact) +
2D Compatibility (PS) -13341 + (NN) -5767 + (LL) 612
1D Compatibility (HY) -6000 + (ID) 950
Total energy: -89278.0 ( -101.11 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_1V4X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V4X-query.scw
PDB file :
Tito_Scwrl_1V4X.pdb
: