Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------MLLLVLAVQM-SGCAT-VRTLDAAKPG------APVVYAGTRLDWYSLHGGCCPMERFGAEAPAHPGLDLPGSALLDT-LLLPFSLATAIGLNLGVSGGM---------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3GN6 Chain:A ((22-321)) | FNPWTDAALDTIVNQALTLYAEMRVVPAHHDAFLAAIDTVSAKLRVLPGFLSLALKQMSGDSTMVKNYPETYKGVLATAYLDGVAAGTQPYFYNLFVRF-ADGRAARAAGFEALFETHIHPLLHAMADGPELLAYRAVLQSVVAGDRHAIYRGAEEIRSFLRRPVELPERETVTVENHVMVPEDKHAAWEPQVAILLQVAQDTFEPQDEPSGVGLPGARDNRYYRKALSTEILRNAHADGGLRAYIMHGVWESVWDHENSHLDPRFLAAAGPVGAAAVVGPVEPFYLTRRLVVAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16098 for 389 contacts (-41.4/contact) +
2D Compatibility (PS) -9075 + (NN) 1176 + (LL) 56
1D Compatibility (HY) 400 + (ID) 1200
Total energy: -24741.0 ( -63.60 by residue)
QMean score : -0.085
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