Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFSWSEILLELLAVAVLFFGVHWSLRHAKTLDQASMLPFADDEEVARRVERETGRSRTGCGCPGRCQGDCRHWDKNWPA
2LX0 Chain:A ((8-27))
-------VIAGLVALLTFLAFGFWLFK-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2LX0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12674 for 85 contacts (-149.1/contact) +
2D Compatibility (PS) -1645 + (NN) 2678 + (LL) 2912
1D Compatibility (HY) -2000 + (ID) 150
Total energy: -10879.0 ( -127.99 by residue)
QMean score : -0.106
(partial model without unconserved sides chains):
PDB file :
Tito_2LX0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LX0-query.scw
PDB file :
Tito_Scwrl_2LX0.pdb
: