Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEFHDDDSQFEEKSKSQIKRELHALQDLGERLTTLQPQLLERLPLTDPLRKALLEAPKHKAHIARKRHIQYIGKLMRDQDVDAIVALIDQVDSSTRQYNERFHALERWRDQLIAGGDAALDAFVGEFPECDRQHLRGLVRHAQHEAAHNKPPAAARKVFKYIRELDETKRGLR
2DHY Chain:A ((20-46))
----------------------------------------------------------------------------------------------------------------------QAMDDFKTMFPNMDYDIIECVLRANSG-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2DHY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11912 for 128 contacts (-93.1/contact) +
2D Compatibility (PS) -2840 + (NN) -2749 + (LL) 11400
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -8851.0 ( -69.15 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_2DHY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DHY-query.scw
PDB file :
Tito_Scwrl_2DHY.pdb
: