Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLLDYLASHPLAFVLCTILLGLLVGSFLNVVVHRLPKMMERNWKAEAREALGLEPEPKQATYNLVLPNSACPRCGHEIRPWENI-------PLVSY--LALGGKCSSCKAAIGKRYPLVELATALLSGYVAWHFGFTWQAGAMLLLTWGLLAMSLIDADHQLLPDVLVLPLLWLGLIANHFGLFASLDDALFGAVFGYLSLWSVFWLFKLVTGKEGMGYGDFKLLAMLGAWGGWQILPLTILLSSLVGAILGVIMLRLRNAESGTPIPFGPYLAIAGWIALLWGDQITRTYLQFAGFK |
| 3PY7 Chain:A ((474-516)) | ---------------------------------------------------------------------IRCCYCGGKLTKNEKHRHVLFNEPFCKTRANIIRGRCYDCCRH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4246 for 181 contacts (-23.5/contact) +
2D Compatibility (PS) -3461 + (NN) 311 + (LL) 20472
1D Compatibility (HY) -1600 + (ID) 400
Total energy: 11076.0 ( 61.19 by residue)
QMean score : 0.289
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