Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------MNLLKSLAAVSSITML---SRVLGFVRDTI---LARIFGAGLATDAFFVAFK-----------LPNLLRRIFAEGA------FSQAFVPILAEYKNQQGEEATRT------------FIAYVSGLLTLVL----------ALVTA-LGILAAPWVIWVTAPGFADTPEKFALTT------DLLRVTFPYILLI----SLSSLAGAILNTWNRFSVPAFVPTLLNV-------AMIGFALFLTPYFDPPVMVLGWAVLAGGLLQLLYQLPHLRKIGMLVLPRLNLRDSGVWRVMKL--------------------MLPAILGVSVSQIS-----------LIINTIFASFLAAGSVSWMYYADRLMELPSGVLGV--------ALGTILLPMLAKTYSN----KDRHEYSRL----------LDWGLRLCFLLVLPCSLALAILAEPLTVSLFQY--------GKFTTVDAAMTQRALVAYSVGLLGIILVKVLAPGFYAQQNIRTPVKIALFTLVSTQLMNLA------FIGPLQHAGLALSIGLAACLNA--GLLYWQLRKQRLYLPQPGWAKFLVKLVVAVLAMSAVLLATMHWLPAWEQGAMLERFLRLGLLVVAGLLAYFGMLALLGFRLRDFSRRAVL |
| 4WRT Chain:B ((10-758)) | MNINPYFLFIDVPIQAAISTTFPYTGVPPYSHGTGTGYTIDTVIRTHEYSNKGKQYISDVTGCTMVDPTNGPLPEDNEPSAYAQLDCVLEALDRMDEEHPGLFQAASQNAMETLMVTTVDKLTQGRQTFDWTVCRNQPAATALNTTITSFRLNDLNGADKGGLIPFCQDIIDSLDRPEMTFFSVKNIKKKLPAKNRKGFLIKRIPMKVKDKITKVEYIKRALSLNTMTKDAERGKLKRRAIATAGIQIRGFVLVVENLAKNICENLEQSGLPVGGNEKKAKLSNAVAKMLSNCPPGGISMTVTGDNTKWNECLNPRIFLAMTERITRDSPIWFRDFCSIAPVLFSNKIARLGKGFMITSKTKRLKAQIPCPDLFSIPLERYNEETRAKLKKLKPFFNEEGTASLSPGMMMGMFNMLSTVLGVAALGIKNIGNKEYLWDGLQSSDDFALFVNAKDEETCMEGINDFYRTCKLLGINMSKKKSYCNETGMFEFTSMFYRDGFVSNFAMELPSFGVAGVNESADMAIGMTIIKNNMINNGMGPATAQTAIQLFIADYRYTYKCHRGDSKVEGKRMKIIKELWENTKGRDGLLVADGGPNIYNLRNLHIPEIVLKYNLMDPEYKGRLLHPQNPFVGHLSIEGIKEADITKMDYDAVSGTHSWRTKRNRSILNTDQRNMILEEQCYAKCCNLFEACFNSASYRKPVGQHSMLEAMAHRLRMDARLDYESGRMSKDDFEKAMAHLGEI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -389047 for 3299 contacts (-117.9/contact) +
2D Compatibility (PS) -52588 + (NN) -2890 + (LL) 176
1D Compatibility (HY) -2000 + (ID) 4350
Total energy: -450699.0 ( -136.62 by residue)
QMean score : 0.119
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