Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMRGWILAGLLLAALAAQAGEVHGVEVEARLRDYFFDAARRGDQAMLKEFVEAGFDLDVQDAKGYTALILAAYHGHGGAVEQLLEAGADPCVQDARGNTALMGAIFKGEVRIARRLIGAQCSPDQRNGAGQTAAMYAALFKREELLQALSARGADLGARDALGNSVESLRRGELNGTAAAR
2XEE Chain:A ((18-148))
------------------------------------LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKT----------------
General information:
TITO was launched using:
RESULT:
Template:
2XEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60312 for 1127 contacts (-53.5/contact) +
2D Compatibility (PS) -15176 + (NN) -15815 + (LL) 4708
1D Compatibility (HY) -3600 + (ID) 2250
Total energy: -92445.0 ( -82.03 by residue)
QMean score : 0.782
(partial model without unconserved sides chains):
PDB file :
Tito_2XEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XEE-query.scw
PDB file :
Tito_Scwrl_2XEE.pdb
: