Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRRLPFLLRCALFCGAGLLAATAQARMESLDDDQLSDVVGQAFINLTTDAANGLNFTRINFGADIETQLNMKKLQLGQYNRSGELAGSADIAIDNFALGTVNDTTGAINPFLISNPYIEFAYDGSKMVGIRIGFGEAKGYLSGDIKTLTGNVPVDLYGTGSQLGGSISCGLLALDCLAAKTAITLTGSSQYTAQAELVNSSGNPDPIRAAMIGLKNGTALDMHDSTIIGSLVNVLLPFLTSNDCKLMGAQTCFNLAQYQSFPIGTVDPNNAQNFIDSSKGFFISMQSQNVQWRDQQDPSKLVAALAGAFLNMSRNADGTAPIKVDFGQAFNGIPRQDTCLGGLNKGC |
3SJR Chain:A ((126-165)) | -------------------------------------------------------------------------------------------------------------------------------RAGLERGYQEACQVLR-QLNVYTPAVAGQLQGLLLLTQRLF------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13555 for 187 contacts (-72.5/contact) +
2D Compatibility (PS) -3549 + (NN) 4579 + (LL) 16672
1D Compatibility (HY) -1200 + (ID) 450
Total energy: 2497.0 ( 13.35 by residue)
QMean score : 0.081
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