Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIFVFAALAGSAVLAGCASPQHGAIPVVDSGTPVSNQESGGFRITRTQVPRTQQGAATQGIPQGGDSGVVVMVPQGANSAPIQTFPAQSGAAPISSAPLGTGTQYQAPPSSASTPPLGGSYNMPPSGASRSAPTGIPASGSAGSLAADEQLDG------PVLAMLTTAQQQQGSGDLNSAAASLERAQRIAPREPQVLYRLAQVRLAQGDAAQAEQVARRGLSYANGRPALQAGLWELIAQAREKQGDSAGAALARQKAKVSS |
2GW1 Chain:A ((491-561)) | -------------------------------------------------------------------------------------------------------------------------------------------------AIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEA------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4825 for 405 contacts (-11.9/contact) +
2D Compatibility (PS) -7045 + (NN) -5395 + (LL) 7684
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -13331.0 ( -32.92 by residue)
QMean score : 0.616
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