Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRGRKILTWSLASLVLLLAALVVFIATFDWN---------LIKPTLNE---KVSAALNRPFAINGNLAVAWR-----REEGEEGWRAWIPWPRFSAEDITLGNPEWTAGKTKASEFASLERIEFRLAPLPLL---WQTIRIPQIKLTQPRAELLRLADGRANWDFDLPASDS-DEPSAWQLDIREIGFDKGS--VSLDDQRLKTRLEVLVDPLGKPVPFGQLAG--KALAT-----GDAANAQDYVFGWKVKGTYKGQALAGS-GKVGGMLALQDASKPFPLQAEVSAGSTRAAVVGTLTDP----LNLGALDLRL--------KLSGTSMANLYPLTGITLPDTPAYSTDGHLLARLKEEGGALFRYENFNGKV---GASDLHGSLTFVARQPRPKLSGKLTSEQLRFADLGPLIGADSNAEKQKRGQTSRQPGDKVLPVEEFRTERWRDMDAD----------VEFTGKRIVHSDQ-----LPISDLYTHLVLNDGLLRLEPLRFGVAGGKLESDIRLDGGKQPMQSRVKMS--ARGFKLKQLFPGFAPMQTSFGELNGDASLSGSGNSV---AKILGGADGELKMLINDGAISKGLTEIAGLNVGNYL----VTKLFGDDEVKINCAAADFGLQKGLMTSRLFVFDTENALVNVDGTVNFANEKLDLDVTPHSKGLRIFSLRSPLYVRGTFAKPDAGVHAGPLVARGAGMIALGVTVGPAASLLALVAPSKSDDNQCTALLQRMRLPAKVPAGKR |
| 4AQ1 Chain:A ((172-892)) | --AVPEIVEVTAVNSTTVKVTFNTQIADVDFTNFAIDNGLTVTKATLSRDKKSVEVVVNKPFTRNQEYTITATGIKNLKGETAKELTGKFVWSVQDAVTVALNNSSLKVGEESGLTVKDQDGKDVVGAKVELTSSNTNIVVVSSGEVSVSAAKVTAVKPGTADVTAKVTLPDGVVLTNTFKVTVTEVPVQVQNQGFTLVDNLSNAPQNTVAFNKAEKVT-SMFAGETKTVAMYDTKNGDPETKPVDFKDATVRSLNPIIATAAINGSELLVTANAGQSGKASFEVTFKDNTKRTFTVDVKKEPVLQDIKVDATSVKLSDEAVGGGEVEGVNQKTIKVSAVDQYGKEIKFGTKGKVTVTTNTEG-LVIKNVNSDNTIDFDSGNSATDQFVVVATK------DKIVNGKVEVKYFKNASDTTPTSTKTITVNVVNVKADATPVGLDIVAPSEIDVNAPNTASTADVDFINFESVEIYTLDSNGNRLKKVTPTATTLVGTNDYVEVNGNVLQFKGN---DELTLLTSSSTVNVDVTADGITKRIPVKYINSASVPASATVATSPVTVKLNSSDNDLTFEELIFGVID--PTQLVKDEDINEFIAVSKAAKNDGYLYNKPLVTVKDASGEVIPTGANVYGLNHD----------------ATNGNIWFDEEQAGL-----AKKFSDVHFDVDFSLANVVKTGSGTVSSSPSLSDAIQLTNSGDAVSFTLVIKSIYVKGADKDDN-NLLAAPVSVNVTVTKGS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75989 for 4751 contacts (-16.0/contact) +
2D Compatibility (PS) -65913 + (NN) 12207 + (LL) 2408
1D Compatibility (HY) -17600 + (ID) 4850
Total energy: -149737.0 ( -31.52 by residue)
QMean score : 0.151
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