Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVNLILVGPMGAGKSTIGRLLAKELHLAFKDSDKEIEQRCGANIPWIFDVEGEVGFREREQAMLTELCAADGMVIATGGGAVMRDGNRQVLRAGGRVVYLHASVEHQIARTARDRNRPLLQKPNPGQILRDLMALRDPLYREIADVVVETDERPPRLVVQEILERLRKLPPR
2IYZ Chain:A ((6-170))
----VLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVVRAALADHDGVLSLGGGAVTSPGVRAAL-AGHTVVYLEISAAEGVRRTGGNTVRPLLAGPDRAEKYRALMAKRAPLYRRVATMRVDTNR-NPGAVVRHILSRLQVPS--
General information:
TITO was launched using:
RESULT:
Template:
2IYZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80516 for 1262 contacts (-63.8/contact) +
2D Compatibility (PS) -18304 + (NN) -10050 + (LL) 656
1D Compatibility (HY) -9600 + (ID) 3650
Total energy: -121464.0 ( -96.25 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_2IYZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IYZ-query.scw
PDB file :
Tito_Scwrl_2IYZ.pdb
: