Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLQATCARIARRFVWRNRMPRRLFIGLFLLPLPLFAAPPKDELAYAVGARLGMRLQ-----QEMPGLELS--ELLLGLRQAYRGEALEIPPERIEQLLLQHENATTETPRTTPAEARFLANE------KARF----GVRELTGGVLVSELRRGQGNGIGAATQVHVRYRGLLADGQVFDQSESAE---WFALDSVIEGWRTALRAMPVGARWRVVIPSAQAYGHEGAGDLIPPDAPLVFEIDLLGFR
1Q6I Chain:A ((24-224))
-------------------------------------------AYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKS-KLSDQEIEQTLQAFE-ARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPG-IPPNSTLVFDVELLDVK
General information:
TITO was launched using:
RESULT:
Template:
1Q6I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76500 for 1191 contacts (-64.2/contact) +
2D Compatibility (PS) -20087 + (NN) -10667 + (LL) 4168
1D Compatibility (HY) -12400 + (ID) 3150
Total energy: -118636.0 ( -99.61 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_1Q6I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q6I-query.scw
PDB file :
Tito_Scwrl_1Q6I.pdb
: