Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKSQEPTAALDAEQVAAYLSQHPEFFVEHDELIPELRIPHQPGDAVSLVERQVRLLRERNIEMRHRLSQLMDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHEFQVPYVSLILFSDSSVS-V-GR--SVSSAEA----------HQAIGGLLSGGKTVCGVLRPHELA-FLFG---E-SDRDEIGSAAVVSLSF-QGLHGVLAIGSPDP-QHYKSSLGTLFLGYVAEVLARVLPRFSSPLRSVR
3OOV Chain:A ((6-167))
---------------------------------------------------------------------------------------QISSRIQKSIDVDEVLRLCAEGLHDVLGYERVNILMADTARTSLSFVAAVGTADFNPAGVVLPLDQRGGVITKCFTDRQVYMIDDVSAYPTDFRLQSPYDAIRALRSKSFVICPIVVKGEAIGVFAVDNRSSRRSLNDT-DVDTIKLFADQASSAIVRINLLK----
General information:
TITO was launched using:
RESULT:
Template:
3OOV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112869 for 1033 contacts (-109.3/contact) +
2D Compatibility (PS) -14974 + (NN) -6569 + (LL) 7908
1D Compatibility (HY) -5200 + (ID) 600
Total energy: -132304.0 ( -128.08 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_3OOV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OOV-query.scw
PDB file :
Tito_Scwrl_3OOV.pdb
: