Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
3C3I Chain:A ((2-128))
-SSLLVK----KLVESATTPMRGSEGAAGYDISSV--EDVVVPAMGRIAVSTGISIRVPD-GTYGRIAPRSGLAYKYGIDV--LAGVIDSDYRGEVKVILYNTTERDYIIKKGDRIAQLILEQIVTPGVAVVLDLSD--------------
General information:
TITO was launched using:
RESULT:
Template:
3C3I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102855 for 854 contacts (-120.4/contact) +
2D Compatibility (PS) -13939 + (NN) -5626 + (LL) -140
1D Compatibility (HY) -9200 + (ID) 2400
Total energy: -134160.0 ( -157.10 by residue)
QMean score : 0.367
(partial model without unconserved sides chains):
PDB file :
Tito_3C3I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C3I-query.scw
PDB file :
Tito_Scwrl_3C3I.pdb
: