Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNINATLIGQSVAFFIFVLFCMKFVWPPVIAALQERQKKIADGLDAANRA-ARDLELAHEKAGQQLREAKAQAAEIVEQAKKRANQIVDEARDQARTEGERLK---AQAQAEIEQELNSVKDALRAQVGALAVTGAEKILGASIDANAHEQLVSKLAAEI
2A01 Chain:A ((90-187))
--------------------------------LEEVKAKVQPYLDDFQKKWQEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGGA------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A01.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 28833 for 451 contacts (63.9/contact) +
2D Compatibility (PS) -10795 + (NN) -7390 + (LL) 6204
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: 13252.0 ( 29.38 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_2A01.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A01-query.scw
PDB file :
Tito_Scwrl_2A01.pdb
: