Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKG-TVGHSFKHW---PKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANH--YE-LNIFENTVVTNISADD---AYYTIATT-----TETYHADYIFVATGDYNFPKK--P--FKYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNN-GQYHIS--FDSG-Q-SVHTPHEPILATGFDATKNPI-VQQ-LFVTTN-QDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC |
| 1ZMD Chain:A ((5-345)) | -IDADVTVIGSGPGGYVAAIKAAQLGF-KTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMA-HGTDF---AS---RGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGID------MEISKNFQRILQKQ-GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQ-TKIPNIYAIGDVVAGPM----LAHKAEDEGIICVEGMAGG-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151807 for 2546 contacts (-59.6/contact) +
2D Compatibility (PS) -34158 + (NN) -12002 + (LL) 3636
1D Compatibility (HY) -10800 + (ID) 2550
Total energy: -207681.0 ( -81.57 by residue)
QMean score : 0.385
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