Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNPTFGEKIDNVDYRSRFGVYAIIPNPTHDKIILVQAPN----GAWFLPGGEIEENENHLEALTRELIEELGYSATIGHYYGQADEYFYSRHRDTYYYNPAYIYEVTAYHKE--QAPLEDFNHLAWFPIQEAKEKLK---RGSHRWGVQAWEKNHHSRK
2B0V Chain:A ((6-138))
---------------KPNVTVAAVIEQD--DKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVLTGIYHWTCA----SNGTTYLRFTFSGQVVSFDPDRKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIEDYHAGKRYPL
General information:
TITO was launched using:
RESULT:
Template:
2B0V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48714 for 899 contacts (-54.2/contact) +
2D Compatibility (PS) -13359 + (NN) -3131 + (LL) 788
1D Compatibility (HY) -2800 + (ID) 1250
Total energy: -68466.0 ( -76.16 by residue)
QMean score : 0.325
(partial model without unconserved sides chains):
PDB file :
Tito_2B0V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B0V-query.scw
PDB file :
Tito_Scwrl_2B0V.pdb
: