Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLSKITIAS---DAVNVIIEISAN-AEPVKYEFDKELGLLRVDRFLSTAMVYPCNYGFVPNTCAGDGDPVDVLVLTQFPLAPGVLISVRPVGALLTKDEKGKDEKVLAVPVSSVDSYYDHVKNCSDLPKNLLDKITHFFLHYKDLEKEKTVTVGEWVDAEKAKKIVESAIKSRN
3FQ3 Chain:A ((22-195))
MNIDAISIGSNPPEDVNVIIEVPVGGQ-PIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSEDGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYTDMPEITLKQIAHFFEHYKDLEPGKWVKIGDWGDEDYARKFIVEAIERAK
General information:
TITO was launched using:
RESULT:
Template:
3FQ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105379 for 1287 contacts (-81.9/contact) +
2D Compatibility (PS) -18327 + (NN) -4712 + (LL) 104
1D Compatibility (HY) -18000 + (ID) 4200
Total energy: -150514.0 ( -116.95 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_3FQ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FQ3-query.scw
PDB file :
Tito_Scwrl_3FQ3.pdb
: