Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEK-QDVTVEQVNEAMKNASNESFGYTEDEIVSSDVVGMTYGSLFDATQTRVMS-VGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK
3LVF Chain:P ((3-338))MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQD-VTVEQVNEAMKNASNESFGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDR-QLVKVAAWYDNEMSYTAQLVRTLAYLAELSK


General information:
TITO was launched using:
RESULT:

Template: 3LVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153538 for 2917 contacts (-52.6/contact) +
2D Compatibility (PS) -35145 + (NN) -8594 + (LL) 24
1D Compatibility (HY) -41600 + (ID) 16500
Total energy: -255353.0 ( -87.54 by residue)
QMean score : 0.530

(partial model without unconserved sides chains):
PDB file : Tito_3LVF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LVF-query.scw
PDB file : Tito_Scwrl_3LVF.pdb: