Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKSFITVTLALGMIATTGATVTSNEVSAAEKDKLPATQKAKEMQNVPYTIAVDGIMAFNQSYLNLPKDSQLSYLDLGNKVKALLYDERGVTPEKIRNAKSAVYTITWKDGSKKEVDLKKD---SYTANL---------FDSNSIKQIDINVKTK
1AN8 Chain:A ((101-208))
----------------------------------------------KLLGNLFISGESQQNLNNKIILEKDIVTFQEIDFKIRKYLMDNYKIYDAT-SPYVSGRIEIGTKDGKHEQIDLFDSPNEGTRSDIFAKYKDNRIINMKNFSHFDIYLEK-
General information:
TITO was launched using:
RESULT:
Template:
1AN8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23334 for 599 contacts (-39.0/contact) +
2D Compatibility (PS) -10362 + (NN) -2713 + (LL) 4296
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -37613.0 ( -62.79 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_1AN8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AN8-query.scw
PDB file :
Tito_Scwrl_1AN8.pdb
: