Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEVKTFY-NGNTMPQIGLGTFRVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGTNE------------------AVMVDTWKGMEDLYKNNKAKNIGVSNFEPEHLEALLAQV--SIKPVINQVEYHPYLTQHKLKLYLAAQHIVMESWSPLMNAQIL----------NDETIKDIAQELGKSPAQVVLRWNVQHGVVIIPKSVTPNRISENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKTFEG |
1US0 Chain:A ((1-301)) | MASRILLNNGAKMPILGLGTWKSP-PGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCAL------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1US0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -110810 for 2305 contacts (-48.1/contact) +
2D Compatibility (PS) -29147 + (NN) -13709 + (LL) -40
1D Compatibility (HY) -29200 + (ID) 5900
Total energy: -188806.0 ( -81.91 by residue)
QMean score : 0.468
|
|
|