Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSVAIIGAGITGLSSAYFLKQQDPNIDVTIFEASNRPGGKIQSYRKDGYMIELGPESYLGRK--TIMTELAKDIGLEQDIVTNTTGQ-SYIFAKNKLYPIPGGSIMGIPTDIKPFVTTKLISPLGKLRAGLDLIKKPIQMQDGDISVGAFFRARLGNEVLENLIEPLMGGIYGTDIDKLSLMSTFPNFKEKEEAFGSLIKGMKDEKNKRLKQRQLYPGAPKGQFKQFKHGLSSFIEALEQDVKNKGVTIRYNTSVDDIITSQKQYK-IVYSNQQEDVFDGVLVTTPHQVFLNWFGQD-P-A----F-DYFKTMDSTTVATVVLAFDEKDIENTYDGTGFVIARTSDTDITACTWTSKKWPFTTPEGKVLIRAYV--GKPGDTVVDDHTDNELVSIVRRDLSQMMTFKGDPEFTIVNRLPKSMPQYHVGHIQQIRQIQAHIKQTYPRLRVTGASFEAV---GLPDCITQGKVAAEEVIAEL |
| 3KA7 Chain:A ((1-422)) | --MKTVVIGAGLGGLLSAARLSKA--GHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIVRSEMTTVRVPLKKGNPDYVKG---F-KDISFNDF--PSLLSYKDRMKIALLIVSTRK-NRPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENM---------------Y------------RFGGTGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVG----HTGVLLTPYT-RRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVK-----NLESEIEMGLEDLKEIFPGKR-YEVLLIQSYHDEWPVNR-AASGT---DPGNET-PFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162877 for 3624 contacts (-44.9/contact) +
2D Compatibility (PS) -43852 + (NN) -24385 + (LL) 3644
1D Compatibility (HY) -14800 + (ID) 3450
Total energy: -245720.0 ( -67.80 by residue)
QMean score : 0.405
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