Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEE-----NYWYTAEPASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGY-GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLHKDGDFLNRKTIDYFVDYAEYCFKEFP-EVKYWTTFNEIGPIGDGQYLVGKFPPGIKYDF-EKVFQSHHNMMVAHARAVKLFKDGGY---QGEIGVVHALPTKYPFDPSNPEDVRAAELEDIIHNKFILDATY-LGKYSRETMEGVQ----------HILSVNGGKLNITDEDYAILDAAKDLNDFLGINYYMSDWMRGYDGESEITHNATGDKGGS-KYQLKGVGQREFDVDVPRTDWDWM-IYPQGLYDQIMRVVKDYPNYHKIYITENGLGYKDEFIESEKTVHDDARIDYVRQHLNVIADAI-KDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFET--QERYPKKSAYWYKELAETKEIK |
2E9L Chain:A ((2-465)) | ---AFPAGFGWAAATAAYQVEGGWDADGKGPCVWDTFTHQGGERVFKNQTGDVACGSYTLWEEDLKCIKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQTLEDQGGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPGI-PHFGTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADPNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLP------EFTEEEKKMI---KGTADFFAVQYYTTRLIKYQENKKG-------ELGILQDAEIEF-----F-PDPSWKNVDWIYVVPWGVCKLLKYIKDTYNN-PVIYITENGFPQSD-----PAPLDDTQRWEYFRQTFQELFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKIIRNNGL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E9L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177261 for 3914 contacts (-45.3/contact) +
2D Compatibility (PS) -46105 + (NN) -14970 + (LL) 1792
1D Compatibility (HY) -27600 + (ID) 7200
Total energy: -271344.0 ( -69.33 by residue)
QMean score : 0.645
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