Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKLILCRHGQSEWNAKNLFTGWEDVNLSEQGINEATRAGEKVRENNIAIDVAFTSLLTRALDTTHYILTESKQQWIPVYKSWRLNERHYGGLQGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEEQREAYLADRRYNHLDKRMMPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRALIKYLEDVSDEDIINYEIKTGAPLVYELTDDLEVIDKYYL
1QHF Chain:A ((1-225))
-PKLVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPPIDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHGNSLRGLVKHLEGISDADIAKLNIPTGIPLVFELDENLKPSKPS--
General information:
TITO was launched using:
RESULT:
Template:
1QHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72662 for 1871 contacts (-38.8/contact) +
2D Compatibility (PS) -23946 + (NN) -5730 + (LL) 476
1D Compatibility (HY) -16800 + (ID) 5550
Total energy: -124212.0 ( -66.39 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_1QHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QHF-query.scw
PDB file :
Tito_Scwrl_1QHF.pdb
: