Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESVKTVKTNKVGKNTETANTEASKETHFKQASAITNTLRSIGGIFTKIAKKVRELVKKHPKKSSVALVVLTHIACKRAKELDDKVQDKSKQAEKENQINWWKYSGLTIAASLLLAACSTGDIDKQIELEQEKKEANKSGIKLEQ---ERQKTEQERQKTNKSEIELEQERQKTNKSGIELANSQIKAEQERQKTEQEKQKANKSEIELEQQKQKTINTQRDLIKEQKDFIKETEQNCQEKHGQLFIKKARIKTGITTGIAIEIEAECKTPKPAKTNQTPIQPKHLPNSKQPRSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYKPSSIAYLELDPRDFKVT---EEWQKENLKIRSKAQAKMLEMRNPQAHLPTSQSLLFVQKIFADINKEIEAVANTEKKTEKAGYGYSKRM
4TKO Chain:B ((3-349))-HRIEYAITNA-------VFVKADELSYLSF---------RVSGKVIEVYKDLGDYVKRGE-----ALAKLDPTYYELEKRTLEKKMSALLEKKKALEIKIQKLEK-GLHISLSAKKLKVESLKKKREALREKLLQVEEKIKLVKLDWERYKSLFQKGLIPRRKFEEVDTNLKVLLHEREYLEKSIQEINTEIKRAKKGIENARNEFKTIEELKKELSSLEEEIKSLKERIKTAEQKIKDT----------VLIAPFDGVVAKRFIS----------------------------RG----------------------------DVVRAGQPAFALVNPESFYVEVLLEETKLKGVKVGNKAYVRLDAYPDIL-FEGVVEEISPVQRIPVKIKITKGDLSLL--RVGMGGEVEIRRT


General information:
TITO was launched using:
RESULT:

Template: 4TKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 143375 for 2066 contacts (69.4/contact) +
2D Compatibility (PS) -33642 + (NN) 434 + (LL) 6324
1D Compatibility (HY) -5200 + (ID) 3000
Total energy: 108291.0 ( 52.42 by residue)
QMean score : 0.260

(partial model without unconserved sides chains):
PDB file : Tito_4TKO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TKO-query.scw
PDB file : Tito_Scwrl_4TKO.pdb: