Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVRDIDKTTSLHLNNEAQFLCFRLDAEKDAQLYGMNIFKIREIIHYDGEVTEILGGSDGVMLGFLSVRGESIPLVDVKRWLHYNANDPSRDLKECSVKDDHNLVIVCHFSNHSIALKVLKIERIIHKNWTEISAGDKQGINEEGKLSAITRFDEQRVVQILDVEKMISDVFPSLKDLDDLTLRCIEAIQSQKLILIAEDSLSALKTLEKIVQTLELRYLAFPNGRELLDYLYEKEHYQQVGVVITDLEM-PVISGFEVLKTIKADSRTEHLPVIINSSMSSDSNRQLAQSLEADGFVVKS-NILEIHEMLKKTLS |
| 2GKG Chain:A ((3-119)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKILIVESDTALSATLRSALEGRGFTVDETTDGKGSVEQIRR----DRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVIIGNP-DGFAQHRKLKAHADEYVAKPVDADQLVERAGALIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70429 for 889 contacts (-79.2/contact) +
2D Compatibility (PS) -12451 + (NN) -7279 + (LL) 14236
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -78473.0 ( -88.27 by residue)
QMean score : 0.606
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