Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKKHKIPTLKYFLRSLKQIYRLITFKEKMIFFLLVLMAVFSSFVEVMSLTLLMPFITLASDPSRALDDKDWKMVYDFFHFSSPVRLMYFFSFCLVGIYLFRMFYGVFFTYLRGRFSNKKAYQIKQQLFLQHIKNNYLSHLNHNLDSLRDIINNKAEGMFMSFNAFLSLLTEITVIVFFYSTLILTNWKITLVFTTILALQIFFIVKKVTVLIKKKGEMAAKSKAQTLKVFSKFFSNFKITKLKDNHEEAHKLFGENSRKAHDTEIIYSTLQVVPRYSIETVGFSLLILAVAYILFKYGEARMVLPTISMYALALYRILPSVTGVISYYNEIAYNQLATNVVFKSLSKTIVEEDLVPLDFNEKITLQNISFAYKSKHPVLKNFNLTIQKGQKIALIGHSGCGKSTLADIIMGLTYPKSGEIFIDNTLLTSENRRSWRKKIGYIPQNIYLFDGTVGDNIAFG-SA-IDEKRLIKVCKMAHIYDFLCE-HEGLKTQVGEGGAKLSGGQKQRIGIARALYDNPEILVLDEATSALDNETESKIMDEIYQIAKNKTLIVIAHRLSTIERCEVIIDMSQHKDNLG
3VX4 Chain:A ((29-247))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFLDGDISFENLSYKYGFGRDTLSDINLSIKKGSKVSLVGASGSGKTTLAKLIVNFYEPNKGIVRINGNDLKVIDKTALRRHISYLPQQAYVFSGSIMDNLVLGAKEGTSQEDIIRACEIAEIRSDIEQMPQGYQTELSD-GAGISGGQKQRIALARALLTQAPVLILDAATSSLDILTEKKIISNLLQM-TEKTIIFVAHRLSISQRTDEVIVMDQGKIVEQ


General information:
TITO was launched using:
RESULT:

Template: 3VX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138384 for 1704 contacts (-81.2/contact) +
2D Compatibility (PS) -23474 + (NN) -3776 + (LL) 33256
1D Compatibility (HY) -18800 + (ID) 4100
Total energy: -155278.0 ( -91.13 by residue)
QMean score : 0.444

(partial model without unconserved sides chains):
PDB file : Tito_3VX4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VX4-query.scw
PDB file : Tito_Scwrl_3VX4.pdb: