Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPIKTYDIKEEELAKTAYATIKTNKGNITLELFYKDAPQAVSNFVTLAKEGFYNGLNFHRVIAGFVAQGGCPYGTGTGGP---EHRIKCEVAHNPNKHQ-RGSISMAHAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSAESLSVLDKIKQGDIIES-VVFSPSL
2HQ6 Chain:A ((19-171))
-----------SEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFH-SRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTGDT-VYNMLRLSEVDIDDDERPHNPHK
General information:
TITO was launched using:
RESULT:
Template:
2HQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61507 for 1140 contacts (-54.0/contact) +
2D Compatibility (PS) -15779 + (NN) -5380 + (LL) 856
1D Compatibility (HY) -6800 + (ID) 2700
Total energy: -91310.0 ( -80.10 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_2HQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HQ6-query.scw
PDB file :
Tito_Scwrl_2HQ6.pdb
: