Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKPLVGINMKNYINTRAQTSEWLEATIPLLGN--FSDVDTFIFPSMGTLETTANLLAG--TSFGFGPQNMAPEKSGPLTGEFSVESIIDLSANYVEIGHAERKNLFHEKTSEIAKKIQLALDEKITPVVCVGEGIRANDTNELKNALKKQIEALFDTIQVTQFKNVVLAYEPEWAIGKANSADTDYIESAHQALREIIRELGGD--ETLVRIIYGGSVSKENAAEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG |
3TA6 Chain:A ((3-257)) | -RKPLIAGNWKMNLNHY-EAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAAIAAG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149421 for 2164 contacts (-69.0/contact) +
2D Compatibility (PS) -27107 + (NN) -9812 + (LL) 296
1D Compatibility (HY) -15200 + (ID) 3750
Total energy: -204994.0 ( -94.73 by residue)
QMean score : 0.612
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