Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKPLVGINMKNYINTRAQTSEWLEATIPLLGN--FSDVDTFIFPSMGTLETTANLLAG--TSFGFGPQNMAPEKSGPLTGEFSVESIIDLSANYVEIGHAERKNLFHEKTSEIAKKIQLALDEKITPVVCVGEGIRANDTNELKNALKKQIEALFDTIQVTQFKNVVLAYEPEWAIGKANSADTDYIESAHQALREIIRELGGD--ETLVRIIYGGSVSKENAAEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG |
| 3TA6 Chain:A ((3-257)) | -RKPLIAGNWKMNLNHY-EAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAAIAAG--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -149421 for 2164 contacts (-69.0/contact) +
2D Compatibility (PS) -27107 + (NN) -9812 + (LL) 296
1D Compatibility (HY) -15200 + (ID) 3750
Total energy: -204994.0 ( -94.73 by residue)
QMean score : 0.612
|
|
|