Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METRELKNGQIMMIRKATKEDSSNIITYLNEVAGETDYLSFGQGEFAFSIAEEAEYIEESDKNPGSVMLLCFIDDELASISQLIGHIKKRELHTSELAISIRKKYWGLGIGTICMEELIKYAKSSEYLKLIYLEVVTENKRAINLYKKFGFIEAGEIPALMQVDRRYLDVTMMYLVI
3WR7 Chain:A ((2-161))
----------SVKLRPLEREDLRYVHQLDNNASVMR-YWFEE---PYEAFVELSDLYDKHIHDQSERRFVVECDGEKAGLVELVEIN--HVHRRAEFQIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFSVEGELMHEFFINGQYRNAIRMCIF-
General information:
TITO was launched using:
RESULT:
Template:
3WR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115082 for 1137 contacts (-101.2/contact) +
2D Compatibility (PS) -16996 + (NN) -2155 + (LL) 984
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -140149.0 ( -123.26 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_3WR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WR7-query.scw
PDB file :
Tito_Scwrl_3WR7.pdb
: