Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIRKIAIAALSVVVAGSLLTACGGGNSKSD--DNGKTKVTFWAAPNP-TQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKAIVPLNDVKGLDDVVKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYDAASKGNAFVE-D-----GKLVADDKAGTELLTFMSELQKNKLLLAS----KATDPFETGTSIMADNGPWTFPNWDEKFPELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQATDKEKEAAMDFLKFVYNDDKNDLKFLETTNLIPARDDATENETFTAFFKENPELEVYAANVPYSIPAMDDAKYNDIQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGVLQE |
2ZYO Chain:A ((13-393)) | -------------------------------KSEGKPDKLVVWENADDGVQLNNTKKWAGEFTKK-TGIQVEVVPVAL-LKQQEKLTLDGPAGKGADLVT-WPHDRLGEAVTKGLLQPIQVDNSVK----NQFDDVAMKALTY-GGKLYGLPKAIESVALIYNKKLMGQ-----VPATYDELFQYAKANNKPDEQ--KYGVLFEAN-NFY--YT---YFLFAAKGAAVFKEQDGTLDPNEIGLNSPEAVQGMNEVQKWFTEARLPQSLKADTVNGLFKSGKVAAVINGPWAIKDYQAA----G--INVGVAPLPKIDGKD----AQTFIGVKGWYLSAYSKY--PKYATELMQFLTSKE-ALASRFKETGEIPPQKELLNDPMIK----NNPVVNGFAKQASKGVPMPSIPEMGVVWEPINN-AHTFVAQGKQTPEQALNDAVKIMKEKIQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39501 for 3193 contacts (-12.4/contact) +
2D Compatibility (PS) -39385 + (NN) -18367 + (LL) 4264
1D Compatibility (HY) -7600 + (ID) 2700
Total energy: -103289.0 ( -32.35 by residue)
QMean score : 0.438
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