Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEII-----HQKRRVIILNKADTADEKTT----KEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIRAMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFEDQEIGYKLALTGAIKDDLLQMEEIAGYGLRFLENHYPDRLQTWLKVETVSEDPIETLAFIAEKRGLLDRYNDPDYSRAAETVVREIRQQKLGRMSFDFPNWEDEVE |
| 1T9H Chain:A ((82-238)) | ------------------PPICNVDQAVLVFSAVQPSFST-ALLDRFLVLVEANDIQPIICITKMDLIEDQDTEDTIQAYAEDYRNIGYDVYLTSSKDQDSLADIIPHFQ------------------DKTTVFAGQSGVGKSSLLNAISP------------TRHVELIHT-SGGLVADTPGFSSLE------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62811 for 947 contacts (-66.3/contact) +
2D Compatibility (PS) -13275 + (NN) 295 + (LL) 10880
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -71011.0 ( -74.99 by residue)
QMean score : 0.348
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