Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLKRKVGIIGTGHVGSDVAFSLVTQGICDEIVLIDKIETKAESEALELRDMASMTNSYTMITSNDWSA-LGDADVIVMAVGPETLLREDRMEELVETSRSVAEIVPKIIASGFQGIFVNITNPCDVITMLIQKLSGFDHSRVFGTGTSLDTARMRRVVGEALHINPKSVEGYVLGEHGESQFVAWSTVKIGGVSIKDYKTTT-----SLDLPALKDAVRGGGWNILTGKGWTSFGIATAVAGIVDAILTDAKQVFPLAVFSE--K--TSTYIGQPALIGANGVIDILEPPLTETEKINFNESAEIIKNAFQLI
3VPG Chain:A ((1-308))--MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAH-PVWVR-AGSYGDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYRLSALPPGRVVGSGTILDTARFRALLAEHLRVAPQSVHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVEGVLEVSLSLPRILGAGGVEGTVYPSLSPEEREALRRSAEILKEAAFAL


General information:
TITO was launched using:
RESULT:

Template: 3VPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -207376 for 2606 contacts (-79.6/contact) +
2D Compatibility (PS) -31608 + (NN) -6417 + (LL) 184
1D Compatibility (HY) -20800 + (ID) 5000
Total energy: -271017.0 ( -104.00 by residue)
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_3VPG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VPG-query.scw
PDB file : Tito_Scwrl_3VPG.pdb: