Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAKEYAQDTAVIKASLGIDKETGALNTPIHLSSTFHQHDFDN--------YHAYDYARSGNPTREKVEQAIAELEGGTNGFAFASGMAAVSAALFT-LSKGDHFIIAKDVYGGTFRLVEQVLPRFGITHTFVDTT-NIDEVAKAFQANTKLVYLETPSNPLLHVTDIRTVAKLAKANGCYTFVDNTFLTPLI-QKPLELGADLVIHSATKFLGGHSDILAGLIVTNNPNLAE------AV--------------------------YFLQNSTGGVLGVQDSWLLLRGLKTLSVRMKAGTETAEKIALFLNAEPDVVAVHYPGLPSHAGYDIQVEQA-TSGGAVLSFDLGSE-EAVRELVTHLELPVFSVSLGAVESILSYPAKMSHAAVPEEERLAQGITPGLLRFSAGLEDAEDLIADLKQALSFIKKGSVAK |
| 2CTZ Chain:A ((2-421)) | -----RFETLQLHAGYEPEPTTLSRQVPIYPTTSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGG-NFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGLEHVEDLKAELKEALA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CTZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194596 for 3217 contacts (-60.5/contact) +
2D Compatibility (PS) -41218 + (NN) -23786 + (LL) 1120
1D Compatibility (HY) -13600 + (ID) 6200
Total energy: -278280.0 ( -86.50 by residue)
QMean score : 0.486
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