Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLFDETNEFEAKYYRTIWYGYIDNEFAPELSDEIKQLIQRDLAEKTANPIEATHWVFYNETQAGDAIGDKVRSSIMVRYREEKFVVHYNVSDFQFVTVFDVATAFKDQLEQALNA
3IMO Chain:A ((20-133))
-HMALTVKDVNILSQYISGVMARADHH-AGNVEEIALALAGAILWRKDDTNIKVMAHGADTKNVLWVTING-ERYAFSYNHSSEKIEMRKGNIQGNTIHEFDNSTPLSKLVEIFKGL
General information:
TITO was launched using:
RESULT:
Template:
3IMO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13720 for 767 contacts (-17.9/contact) +
2D Compatibility (PS) -12107 + (NN) -2402 + (LL) 404
1D Compatibility (HY) 2400 + (ID) 750
Total energy: -26175.0 ( -34.13 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_3IMO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IMO-query.scw
PDB file :
Tito_Scwrl_3IMO.pdb
: