Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILMDPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINEFAIGDMMPHVTVYFSIDPEEGLKRIYANGSREKNRLDLEKLDFHTKVQEGYQELMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKKIQL
4EDH Chain:A ((5-212))
-TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIGLARAAARGR--LDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEVQAGLDRLLPNLLERLN-
General information:
TITO was launched using:
RESULT:
Template:
4EDH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89053 for 1659 contacts (-53.7/contact) +
2D Compatibility (PS) -22938 + (NN) -11848 + (LL) 588
1D Compatibility (HY) -10000 + (ID) 4100
Total energy: -137351.0 ( -82.79 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_4EDH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EDH-query.scw
PDB file :
Tito_Scwrl_4EDH.pdb
: