Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYEFKDYYQNTVQLSFDDQPFSDSPKHVWVICRFGGKWLLTEHEDRGYEFPGGKVEPMECAEEAALREVKEETGARVKSLKYLGQYKVLGK--EKVIVKNIYFADIEKLEKQADYFETKGPVLFHELPENLSRNKKFSFIMKDSVLPISLKKLKESGWIE
3O8S Chain:A ((68-199))----------------------TPKLDTRAAIFQEDKILLVQENDGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILDKHKNNP--RVTKVFILCRLLGGEFQ-PNSETVASGFFSLD--DL--PPLYLGKNTAEQLALCLEASRSE----


General information:
TITO was launched using:
RESULT:

Template: 3O8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 630 -19726 -31.31 -157.81
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -31.31
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.418

(partial model without unconserved sides chains):
PDB file : Tito_3O8S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3O8S-query.scw
PDB file : Tito_Scwrl_3O8S.pdb: