Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPVTTFPLVDAIL--AGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAVAGAM-LDASADVIGI-EQTSAGYAKIVGC----ALGFPVINIARSSAKLLYESPIIA-ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCM-------TPI-DLPNAIGGYDVIIGATGAT-SVPASMHELLRPGVLLMSASSSDREFDAVALRRRT-T---PNPDCHADLRVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVA-VADEMS-SDHPHLGLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAYGVARTRLMHAGASESLMV |
| 3H9U Chain:A ((23-402)) | ----NEMPGLMELRREYGPSKPLKGAKIAGCLHMTMQTAVLIETLVELGAEVRWAS--CNIFSTQDHAAAAIAKRGIPVFA----W--KGETEEEYMWCMKQTLKGF-----SGDGYPNMLLDDGGDLTNYVLDEC-ELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKANAKERVEVKPQVDRYT--MANGRHIILLAEGRLVNLGCASGHPSFVMSNSFCNQVLAQIELWTNRDTGKYPRAQVYFLPKKLDEKVAALH------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230833 for 3202 contacts (-72.1/contact) +
2D Compatibility (PS) -38065 + (NN) -16487 + (LL) 11568
1D Compatibility (HY) -9200 + (ID) 2950
Total energy: -285967.0 ( -89.31 by residue)
QMean score : 0.388
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