Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMRFLDGHPPGYDLTYNDVFIVPNRSEVASRFDVDLS--TADGSGTTIPVVVANMTAVAGRRMAETVARRGGIVILPQDLPIPAVKQTVAF-VKSRDLVLDTPVTLAPDDSVSDAMALIHKRAHGVAVVILEGRPIGLVRESSCLGVDRFTRVRDIAVTDYVTAPAGTEPRKIFDLLEHAPVDVAVLTDADGTLAGVLSRTGAIRAGIYTPAT-DS-AGRLRIGAAVGINGDVGAKARALAEAGVDVLVIDTAHGHQVKTLDAIKAVSALDLGLPLAAGNVVSAEGTRDLLKAGANVVKVGVGPGAMCTTRMMTGVGRPQFSAVLECASAARQLGGHIWADGGIRHPRDVALALAAGASNVMIGSWFAGTYESPGDLMRDRDDQPYKESYGMASKRAVVARTGADN---------PFDRARKALFEEGISTSRMGLDPDRGGVEDLIDHITSGVRSTCTYVGASNLAELHERA-----VVGVQSGAGFAEGHPLPAGW |
| 4AF0 Chain:A ((59-537)) | ------------GLTYNDFLVLPGHINFPASD-VSLQSKATKNIVLNTPFLSSPMDTVTEDRMAIALALHGGLGIIHHNCSAEEQAAMVRRVKKYEN---------------------------------------------------------------------------------------------------------------YPYASKVPESKQLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALALGASAVMMGGLLAGTTESPGEYFY-HEGKRVKVYRGMGSIEAMEHT-----GLDNAATARYFSEADAVKVAQGVSG----DVADKGSINKFVPYLFTGLQHSLQDAAIKSVSELHSCARSGSLRFELRTAS------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -195031 for 2979 contacts (-65.5/contact) +
2D Compatibility (PS) -36224 + (NN) -11712 + (LL) 7924
1D Compatibility (HY) -22000 + (ID) 5150
Total energy: -262193.0 ( -88.01 by residue)
QMean score : 0.539
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