Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSAPVEALFQPFRLGALELPTRVVMAPMTRNFSPGGVPNAKVVEYYRRRAAAGVGLIVSEGTTVGHKAANGYPNVPRFYGEDALAGWKQVVDAVHAEGGRIVPQLWHVGSVRRLGVEPDASVPGYGPMEKAKD----------------GKVLVHGMSKADIQEVIAAFAQAARDAQAIGMDGVEIHGAHGYLIDQFFWEGSNQRDDEYGGSLANRSRFAVELVRAVRAAVGADFPIIFRFSQWKQQDYSARLVETPEG----LREFLAPLVEAGVDIFHCSTRRFWIPEFEGSELNLAGWTRELTGKPTITVGNVGLDGSEFLQFFGKTDEVAQPASIDGLVERLDKGEFDLVAVGRALLVDPEWAVKVREGRIGDIKPFSREALASLV |
2R14 Chain:A ((8-356)) | ----NPGLFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRAS--AGLIISEATNISPTA-RGYVYTPGIWTDAQEAGWKGVVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQP-VAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGP-ERVGIRLTPFLE---LFGL--TDDEPEAMAFYLAGELDRRGLAYLHFNEPD------TYP-EGFREQMRQRFKGGLIYCGNY-DA------------GRAQ--------ARLDDNTADAVAFGRPFIANPDLPERFRLGA--ALNEPDPSTFYGGA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2R14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -163781 for 2901 contacts (-56.5/contact) +
2D Compatibility (PS) -35860 + (NN) -24897 + (LL) 1800
1D Compatibility (HY) -17200 + (ID) 5600
Total energy: -245538.0 ( -84.64 by residue)
QMean score : 0.576
|
|
|