Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MKQRILIVGAGFAGMWSALSAVRQLDRQGRDDVEVAVLAPQPELRIRPRFY-----EPDVQRMAAPLGELFAAVG--VRFVQGSAQRIDVAGKRVEYRDAEGTLA----------------QLDYDRLVLAAGSGVWRPASVAGIDA-AFDVDQLEDALRLEAHLHALRDLPDSPARN--------TVVVAGGGFTGIETATEMPARLRAILGE-----KAALRVIVVDRGAAIGASMGADLSGLIAEASAELGVEWCLGRSVAAVDAEGVTLDD--------GQRIEAKTVVWTVGV----RASTLTGQIPGERDAQGRLHVDRNLKVLGLDDVYATGDVA-------RAATDDLGNHALMTCQHAIALGRSAGNNVAADLLGVEPIPYSQVKYVTCLDLGGWGAVFTEGWDRQVRFVREEGKKIKTEINGVWIYPPAADRAVALAAADPLIPVVA-------- |
| 4G9K Chain:A ((1-471)) | MKVIDPQHSDKPNVLILGSG----WGAISFLKHIDT---KKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEP-NTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKIDLLFEENNFKPFKYNDLGALAYL---GSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDFFKGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250778 for 3170 contacts (-79.1/contact) +
2D Compatibility (PS) -42652 + (NN) -15193 + (LL) 444
1D Compatibility (HY) -18400 + (ID) 3400
Total energy: -329979.0 ( -104.09 by residue)
QMean score : 0.396
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